User Guide
Learn more about how to use Flywheel to capture, compute, curate, and collaborate
Signing in
Adding data
- Data Exchange
- Importing data overview
- Adding Data
- Capturing data directly from MR Scanner
- Best Practices: Naming acquisitions for automated classification
- How the DICOM Connector uploads an image
Creating and managing projects
- Selecting Data In Flywheel
- Create a project
- Roles and permissions
- Smart Copy
- Sitewide Project Catalog
- Data Views
Form Builder
Viewing images
Gears
- Using gears
- Run a Gear in UI
- Dcm2niix troubleshooting
- Delete gears
- Gear Access
- Knowledge Base: What is a SDK Gear?
Gear Rules
Task Management
Create a config file for the fw ingest command
Search
Downloading data
- Project Exports
- Downloading data
- Downloading sessions or acquisitions from the Web UI
- Downloading an entire project from the Web UI
- Downloading a file from the Web UI
- Use the sync command for downloading data
BIDS resources
- Flywheel + BIDS: Getting Started
- BIDS Study Design Spreadsheet
- BIDS curation tutorial part 1: preparing data
- BIDS curation tutorial part 2: running pre-curation
- BIDS curation tutorial part 3: running the BIDS Curation gear
- BIDS curation tutorial part 4: troubleshooting and debugging
Command-Line Interface (CLI)
- Installing the Flywheel Command–Line Interface (CLI)
- CLI command reference: Ingest dicom
- CLI command reference: Ingest folder
- CLI Command Reference: Ingest Template
- CLI error message: Error while finding module specification for 'flywheel_cli.main' or `Error relocating /opt/...'
- CLI reference guide: fw upload