Skip to content

Release Notes

0.1.0 [2019-12-19]

Enhancements:

  • Added brain extraction functionality using pre-trained Nobrainer deep learning model
  • Added support for custom model input via optional model parameter
  • Added threshold configuration option for binarizing model output (default 0.3)
  • Added largest-label configuration option to remove false positives by zeroing values not connected to largest contiguous region
  • Added rotate-and-predict configuration option to improve prediction accuracy by averaging predictions on rotated volumes
  • Added GPU acceleration support for inference with NVIDIA GPUs
  • Added T1-weighted anatomical volume processing with NIfTI format support
  • Added automatic download of default brain extraction model from neuronets/nobrainer-models repository

Documentation:

  • Added Apache License 2.0
  • Added README with usage instructions, input/output specifications, and GPU execution requirements
  • Added gear manifest with configuration schema and input specifications