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Release Notes

0.1.6_2.6.0 [2026-08-25]

Maintenance:

  • Updated manifest.json classification fields and environment variables to standardized format
  • Updated setuptools from ==78.1.1 to >=82.0.0 and urllib3 from ==2.6.0 to >=2.7.0 to patch CVE-2026-23949 and CVE-2026-24049
  • Added wheel>=0.46.2 to system conda environment security upgrade
  • Updated requires-python from >=3.9.13,<3.13 to >=3.10,<4.0
  • Reordered ruff_format before ruff in .pre-commit-config.yaml

0.1.5_2.6.0 [2026-03-19]

Enhancements:

  • Added examples/run-biomed-clip-from-hugging-face.py example script for zero-shot classification of medical images using the BiomedCLIP model from Hugging Face

Maintenance:

  • Added git to Dockerfile system dependencies
  • Upgraded pinned urllib3 to 2.6.0 and brotli to 1.2.0 in the system conda environment to address security vulnerabilities
  • Added urllib3==2.6.0 and brotli==1.2.0 to project dependencies in pyproject.toml
  • Reformatted CONTRIBUTING.md for improved line length consistency

0.1.4_2.6.0 [2025-09-03]

Maintenance:

  • Updated PyTorch version to 2.6.0

0.1.4 [2025-09-03]

Enhancements:

  • Added PyTorch inference runner gear for executing custom inference scripts on input files
  • Added support for dynamic installation of Python packages required by inference scripts
  • Added GPU acceleration support with NVIDIA CUDA capabilities
  • Added example inference script for CT image segmentation using totalsegmentator
  • Added FileCurator pattern for managing file processing workflows
  • Added optional tagging of processed files via tag configuration parameter
  • Added API key input support for authentication in inference scripts

Documentation:

  • Added comprehensive README with usage instructions, workflow diagrams, and examples
  • Added CONTRIBUTING guide with dependency management, linting, testing, and merge request guidelines

Maintenance:

  • Added Gitlab CI configuration with test automation, security scanning, and build pipeline
  • Added Dockerfile using pytorch/pytorch:2.6.0-cuda12.6-cudnn9-runtime base image
  • Added pre-commit hooks for code quality enforcement (ruff, pytest, gearcheck, hadolint)
  • Added .dockerignore for optimized Docker build context
  • Added uv for dependency management with virtual environment configuration
  • Updated setuptools to 78.1.1 to address security vulnerabilities
  • Added test suite with parser tests and integration test framework
  • Added non-root user (flywheel) for secure container execution